Flights from New York to San Juan (Puerto Rico)

Our cheapest offers for flights from New York to San Juan (Puerto Rico)

Here you can compare cheap flights from New York (NYC) to San Juan (Puerto Rico) (SJU) for one-way or return trips. The following offers were searched for and found on idealo during the last few days. Or start your own flight search to San Juan (Puerto Rico). Prices and availability may change at any time.

Outbound Return Airlines Shop Baggage Price
Best option
New York
San Juan (Puerto Rico)
Outbound
11/09/25
direct
F93545
03h 54min
Return
12/07/25
direct
B61604
04h 12min
Frontier Airlines ?
$206
found 3 days ago
New York
San Juan (Puerto Rico)
Pay attention to transfer at connecting flight
Outbound
12/25/25
2 Stopovers (YYZ, PUJ)
AC3097, TS0986, DM1000
18h 05min
Return
01/03/26
1 Stopover (MSP)
SY0762, SY0233
20h 42min
Air Canada, Air Transat, AraJet
$1,325
New York
San Juan (Puerto Rico)
Outbound
11/09/25
1 Stopover (ATL)
F94601, F92082
08h 14min
Return
12/07/25
direct
F93576
04h 25min
Frontier Airlines
$241
found 3 days ago
New York
San Juan (Puerto Rico)
Outbound
11/09/25
1 Stopover (ATL)
F94601, F92082
08h 14min
Return
12/07/25
direct
F93576
04h 25min
Frontier Airlines ?
$257
found 3 days ago
New York
San Juan (Puerto Rico)
Outbound
11/09/25
1 Stopover (ATL)
F94601, F92082
08h 14min
Return
12/07/25
direct
F93576
04h 25min
Frontier Airlines
$267
found 3 days ago
New York
San Juan (Puerto Rico)
Outbound
11/09/25
direct
B60389
03h 49min
Return
12/07/25
direct
B60390
04h 14min
JetBlue Airways ?
$326
found 3 days ago
New York
San Juan (Puerto Rico)
Outbound
11/20/25
direct
F93547
03h 55min
Return
11/29/25
direct
B62104
04h 04min
Frontier Airlines ?
$326
New York
San Juan (Puerto Rico)
Outbound
11/09/25
direct
B60389
03h 49min
Return
12/07/25
direct
B60390
04h 14min
JetBlue Airways ?
$354
found 3 days ago
New York
San Juan (Puerto Rico)
Outbound
11/20/25
direct
F93573
03h 58min
Return
11/29/25
direct
F93576
04h 20min
Frontier Airlines
$386
New York
San Juan (Puerto Rico)
Outbound
11/20/25
direct
F93573
03h 58min
Return
11/29/25
direct
F93576
04h 20min
Frontier Airlines
$416
Prices based on recent searches, subject to last-minute changes
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Tips and tricks to help you find cheap flights from New York to San Juan (Puerto Rico)

Favorite airline: Spirit Airlines
Spirit Airlines is the most popular airline for flights from New York to San Juan (Puerto Rico).
Spirit Airlines
41 %
United Airlines
27 %
Delta
17 %
Cheapest weekday: Tuesday
The cheapest days to fly on this route are Tuesday.
Direct flights are more expensive
On this route, direct flights are $34.00 more expensive than flights with a stopover.
non stop flight
1 stop
2 stops
03h 58min
09h 20min
11h 56min
$212
$178
$718
The favorite connection is non-stop
Flights from New York to San Juan (Puerto Rico) are most often booked as a direct flight.
Route
bookings
Direct flights
03h 58min, from $212
64 %
1 stopover Miami International Airport, FL
09h 20min, from $178
15 %
1 stopover Hartsfield-Jackson Atlanta International Airport, GA
06h 37min, from $458
9 %

Important flight information

Flight information: New York - San Juan (Puerto Rico)

Roundtrip from $205.98
Flight duration min. 03:44 / max. 04:06
Return flight duration min. 03:55/ max. 04:14
Distance 2599 km
Flights per week 96
Departure airport Airport New York, all Airports (NYC)
Arrival airport Airport San Juan - Luis Muñoz Marín International Airport (SJU)
Destination country Flights to Puerto Rico
Alternative routes to Puerto Rico
Alternative flights to San Juan (Puerto Rico)
Flight destinations with a similar price
Flight destinations with a similar price