Flights from New York to San Juan (Puerto Rico)

Our cheapest offers for flights from New York to San Juan (Puerto Rico)

Here you can compare cheap flights from New York (NYC) to San Juan (Puerto Rico) (SJU) for one-way or return trips. The following offers were searched for and found on idealo during the last few days. Or start your own flight search to San Juan (Puerto Rico). Prices and availability may change at any time.

Outbound Return Airlines Shop Baggage Price
New York
San Juan (Puerto Rico)
Outbound
12/05/25
1 Stopover (FLL)
NK0567, NK3978
10h 46min
Return
-
Spirit Airlines
$91
Best option
New York
San Juan (Puerto Rico)
Outbound
01/10/26
direct
F93573
03h 43min
Return
01/24/26
direct
F93111
04h 25min
Frontier Airlines
$171
New York
San Juan (Puerto Rico)
Please note: transfer for connecting flight
Outbound
12/25/25
3 Stopovers (MSP, TPA, ILG)
SY0568, SY0211, XP0533, XP0584
37h 11min
Return
12/30/25
1 Stopover (MSP)
SY0762, SY0567
18h 20min
Sun Country Airlines, Avelo Airlines
$898
New York
San Juan (Puerto Rico)
Outbound
01/10/26
direct
F93573
03h 43min
Return
01/24/26
direct
F93111
04h 25min
Frontier Airlines
$195
New York
San Juan (Puerto Rico)
Outbound
01/10/26
direct
F93573
03h 43min
Return
01/24/26
direct
F93111
04h 25min
Frontier Airlines ?
$202
New York
San Juan (Puerto Rico)
Outbound
01/10/26
direct
B62389
04h 06min
Return
01/24/26
direct
B62390
04h 13min
JetBlue Airways ?
$203
New York
San Juan (Puerto Rico)
Outbound
01/10/26
1 Stopover (DTW)
NK2368, NK1842
09h 03min
Return
01/24/26
1 Stopover (DTW)
NK1841, NK1413
13h 04min
Spirit Airlines
$276
New York
San Juan (Puerto Rico)
Outbound
04/03/26
direct
F93547
03h 54min
Return
04/16/26
direct
B62004
04h 14min
Frontier Airlines ?
$284
New York
San Juan (Puerto Rico)
Outbound
02/14/26
1 Stopover (DFW)
NK3774, NK2653
12h 53min
Return
02/22/26
2 Stopovers (DFW, DTW)
NK2654, NK2129, NK1413
25h 36min
Spirit Airlines
$394
New York
San Juan (Puerto Rico)
Outbound
01/10/26
1 Stopover (IAH)
UA1004, UA1497
09h 41min
Return
01/24/26
direct
UA2219
04h 19min
United Airlines ?
$450
Prices based on recent searches, subject to last-minute changes
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Tips and tricks to help you find cheap flights from New York to San Juan (Puerto Rico)

Favorite airline: Spirit Airlines
Spirit Airlines is the most popular airline for flights from New York to San Juan (Puerto Rico).
Spirit Airlines
41 %
United Airlines
27 %
Delta
17 %
Cheapest weekday: Tuesday
The cheapest days to fly on this route are Tuesday.
Direct flights are more expensive
On this route, direct flights are $34.00 more expensive than flights with a stopover.
non stop flight
1 stop
2 stops
03h 58min
09h 20min
11h 56min
$212
$178
$718
The favorite connection is non-stop
Flights from New York to San Juan (Puerto Rico) are most often booked as a direct flight.
Route
bookings
Direct flights
03h 58min, from $212
64 %
1 stopover Miami International Airport, FL
09h 20min, from $178
15 %
1 stopover Hartsfield-Jackson Atlanta International Airport, GA
06h 37min, from $458
9 %

Important flight information

Flight information: New York - San Juan (Puerto Rico)

Cheapest outbound flight from $90.97
Roundtrip from $170.97
Flight duration min. 03:44 / max. 04:06
Return flight duration min. 03:55/ max. 04:14
Distance 2599 km
Flights per week 96
Departure airport Airport New York, all Airports (NYC)
Arrival airport Airport San Juan - Luis Muñoz Marín International Airport (SJU)
Destination country Flights to Puerto Rico
Alternative routes to Puerto Rico
Alternative flights to San Juan (Puerto Rico)
Flight destinations with a similar price