Flight Routes from New York to San Juan (Puerto Rico)

Trip type

Our cheapest offers for flights from New York to San Juan (Puerto Rico)

Here you can compare cheap flights from New York (JFK) to San Juan (Puerto Rico) (SJU) for one-way or return trips. The following offers were searched for and found on idealo during the last few days. Or start your own flight search to San Juan (Puerto Rico). Prices and availability may change at any time.

Outbound Return Airlines Shop Baggage Price
Best option
New York
San Juan (Puerto Rico)
Outbound
05/16/26
direct
F93547
03h 57min
Return
05/29/26
direct
B60704
03h 54min
Frontier Airlines ?
$208
New York
San Juan (Puerto Rico)
Outbound
05/16/26
direct
F93547
03h 57min
Return
05/29/26
direct
B60504
03h 59min
Frontier Airlines ?
$210
New York
San Juan (Puerto Rico)
Outbound
05/16/26
direct
B60803
04h 08min
Return
05/29/26
direct
B60504
03h 59min
JetBlue Airways ?
$286
New York
San Juan (Puerto Rico)
Outbound
05/16/26
direct
B60703
04h 07min
Return
05/29/26
direct
B60504
03h 59min
JetBlue Airways ?
$314
New York
San Juan (Puerto Rico)
Outbound
06/25/26
1 Stopover (ATL)
F94731, F92300
12h 35min
Return
06/30/26
direct
B60704
03h 57min
Frontier Airlines ?
$444
New York
San Juan (Puerto Rico)
Outbound
05/16/26
1 Stopover (MCO)
F94871, F94726
13h 01min
Return
05/29/26
4 Stopovers (IAH, SJO, MIA, CLT)
UA2495, UA2448, AA0498, AA1212, AA1029
56h 25min
Frontier Airlines ?
$485
New York
San Juan (Puerto Rico)
Outbound
06/25/26
direct
B62903
04h 08min
Return
06/30/26
direct
B60504
03h 59min
JetBlue Airways
$525
New York
San Juan (Puerto Rico)
Outbound
06/25/26
2 Stopovers (ATL, MCO)
F94731, F93508, F94726
12h 56min
Return
06/30/26
1 Stopover (MIA)
AA3165, AA1040
13h 59min
Frontier Airlines ?
$565
New York
San Juan (Puerto Rico)
Outbound
05/16/26
1 Stopover (MIA)
AA2017, AA2834
06h 52min
Return
05/29/26
1 Stopover (CLT)
AA3187, AA0657
12h 57min
American Airlines ?
$707
New York
San Juan (Puerto Rico)
Outbound
06/25/26
1 Stopover (DFW)
AA0813, AA0702
16h 49min
Return
06/30/26
1 Stopover (MIA)
AA2581, AA0944
08h 21min
American Airlines ?
$783
Prices based on recent searches, subject to last-minute changes
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Tips and tricks to help you find cheap flights from New York to San Juan (Puerto Rico)

Favorite airline: Delta
The majority of passengers on the route New York – San Juan (Puerto Rico) prefer to fly with Delta.
Delta
59 %
American Airlines
14 %
Avianca
14 %
Direct flights are cheaper
Compared to flights with a stopover, direct flights are $207.00 cheaper on this route.
non stop flight
1 stop
2 stops
04h 19min
06h 37min
15h 23min
$251
$458
$654
The favorite connection is non-stop
Direct flights are especially popular on this route. 67 % of travelers will book a direct flight.
Route
bookings
Direct flights
04h 19min, from $251
67 %
2 stopovers Minneapolis - St. Paul International Airport, MN Orlando International Airport, FL
15h 23min, from $654
17 %
1 stopover Charlotte Douglas International Airport, NC
14h 06min, from $515
11 %

Important flight information

Flight information: New York - San Juan (Puerto Rico)

Roundtrip from $207.48
Flight duration min. 03:44 / max. 04:06
Return flight duration min. 03:55/ max. 04:08
Distance 2581 km
Flights per week 64
Departure airport Airport New York - John F. Kennedy International Airport, NY (JFK)
Arrival airport Airport San Juan - Luis Muñoz Marín International Airport (SJU)
Destination country Flights to Puerto Rico
Alternative routes to Puerto Rico
Alternative flights to San Juan (Puerto Rico)
Flight destinations with a similar price
Flight destinations with a similar price