Outbound | Return | Airlines | Shop | Baggage | Price | ||
---|---|---|---|---|---|---|---|
Best option San Francisco San Juan (Puerto Rico) | Outbound 10/18/25 1 Stopover (ATL) F91448, F92082 12h 46min | Return 11/17/25 1 Stopover (FLL) B62054, B60577 17h 25min | | ![]() | ? | $351 | |
San Francisco San Juan (Puerto Rico) | Outbound 09/19/25 2 Stopovers (MSP, DTW) SY0396, NK2383, NK3898 19h 28min | Return 09/29/25 2 Stopovers (ATL, MSP) NK0838, NK1299, SY0395 18h 53min | | ![]() | $518 | ||
San Francisco San Juan (Puerto Rico) | Outbound 09/19/25 2 Stopovers (CLT, MIA) AA3082, AA3068, AA1341 26h 19min | Return 09/29/25 1 Stopover (MIA) AA1341, AA2035 11h 43min | | ![]() | ? | $376 | |
San Francisco San Juan (Puerto Rico) | Outbound 09/19/25 2 Stopovers (DFW, MIA) AA2387, AA3189, AA1613 19h 17min | Return 09/29/25 1 Stopover (MIA) AA3089, AA2035 15h 08min | | ![]() | ? | $386 | |
San Francisco San Juan (Puerto Rico) | Outbound 10/18/25 1 Stopover (ORD) UA2097, UA1996 12h 44min | Return 11/17/25 1 Stopover (IAD) UA2024, UA0367 11h 14min | | ![]() | ? | $416 | |
San Francisco San Juan (Puerto Rico) | Outbound 09/19/25 1 Stopover (JFK) B60816, B61603 10h 42min | Return 09/29/25 1 Stopover (JFK) B60904, B60615 15h 02min | | ![]() | ? | $417 | |
San Francisco San Juan (Puerto Rico) | Outbound 10/18/25 1 Stopover (IAH) UA1788, UA0701 10h 28min | Return 11/17/25 1 Stopover (IAD) UA2024, UA0367 11h 14min | | ![]() | ? | $418 | |
San Francisco San Juan (Puerto Rico) | Outbound 10/18/25 1 Stopover (ORD) AA2761, AA2852 10h 58min | Return 11/17/25 1 Stopover (MIA) AA1870, AA1557 21h 26min | | ![]() | ? | $435 | |
San Francisco San Juan (Puerto Rico) | Outbound 07/25/25 1 Stopover (MSP) SY0398, SY0783 12h 17min | Return 08/17/25 2 Stopovers (DTW, MSP) NK3899, SY1908, SY0395 26h 09min | | ![]() | $498 | ||
San Francisco San Juan (Puerto Rico) | Outbound 09/19/25 2 Stopovers (DFW, MIA) AA3293, AA3055, AA1329 18h 46min | Return 09/29/25 1 Stopover (MIA) AA1341, AA2035 11h 43min | | ![]() | ? | $548 |
Airline
- American Airlines
- Sun Country Airlines
- United Airlines
- Frontier Airlines
- Alaska Airlines
Tips and tricks to help you find cheap flights from San Francisco to San Juan (Puerto Rico)
Favorite airline: American Airlines
Flight tickets on the route San Francisco – San Juan (Puerto Rico) are most frequently booked with American Airlines.

American Airlines
60 %

Flair Airlines
20 %

United Airlines
20 %
Favourite connection: via Charlotte
The most popular route is via Charlotte and is booked by 62 % of all travelers.
Route
bookings
1 stopover Charlotte Douglas International Airport, NC
11h 40min, from $650
62 %
1 stopover Houston - George Bush Intercontinental Airport, TX
11h 47min, from $740
25 %
2 stopovers Los Angeles International Airport, CA Dallas-Fort Worth International Airport, T
20h 12min, from $611
12 %
Important flight information
Flight information: San Francisco - San Juan (Puerto Rico)
Roundtrip from | $350.74 |
---|---|
Distance | 5841 km |
Departure airport | Airport San Francisco International Airport, CA (SFO) |
Arrival airport | Airport San Juan - Luis Muñoz Marín International Airport (SJU) |
Destination country | Flights to Puerto Rico |
Alternative flights to San Juan (Puerto Rico)
- Flight Boston - San Juan (Puerto Rico) from $160
- Flight Detroit - San Juan (Puerto Rico) from $382
- Flight Orlando - San Juan (Puerto Rico) from $184
- Flight Miami - San Juan (Puerto Rico) from $204
- Flight Atlanta - San Juan (Puerto Rico) from $177
Flight destinations with a similar price
- Flight San Francisco - Guadalajara from $379
- Flight San Francisco - Mexico City from $325
- Flight San Francisco - Puerto Vallarta from $342
- Flight San Francisco - Los Cabos from $337
- Flight San Francisco - Fairbanks from $357
- Flight San Francisco - Guatemala from $379
- Flight San Francisco - Nassau from $380
- Flight San Francisco - Chattanooga from $330
- Flight San Francisco - Puebla from $380