Flights from Jacksonville, Florida to San Juan (Puerto Rico)

Our cheapest offers for flights from Jacksonville, Florida to San Juan (Puerto Rico)

Here you can compare cheap flights from Jacksonville, Florida (JAX) to San Juan (Puerto Rico) (SJU) for one-way or return trips. The following offers were searched for and found on idealo during the last few days. Or start your own flight search to San Juan (Puerto Rico). Prices and availability may change at any time.

Outbound Return Airlines Shop Baggage Price
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/19/25
2 Stopovers (CLT, MIA)
AA1834, AA3068, AA1341
26h 11min
Return
09/29/25
2 Stopovers (MIA, CLT)
AA1329, AA1069, AA1925
20h 36min
American Airlines ?
$246
Best option
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
06/18/25
1 Stopover (BOS)
B60810, B60561
28h 41min
Return
07/15/25
direct
F93305
03h 21min
JetBlue Airways ?
$433
Jacksonville, Florida
San Juan (Puerto Rico)
Pay attention to transfer at connecting flight
Outbound
06/18/25
2 Stopovers (ORF, FLL)
MX0401, G42159, NK1037
23h 58min
Return
07/15/25
2 Stopovers (MCO, ORF)
NK3160, NK1574, MX0400
23h 02min
Breeze Airways, Allegiant Air, Spirit Airlines
$965
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/19/25
2 Stopovers (CLT, MIA)
AA1490, AA3068, AA1613
25h 41min
Return
09/29/25
2 Stopovers (MIA, CLT)
AA1329, AA1069, AA1925
20h 36min
American Airlines ?
$268
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
06/18/25
1 Stopover (CLT)
AA0548, AA2830
15h 45min
Return
07/15/25
2 Stopovers (MIA, CLT)
AA1613, AA1596, AA1834
19h 16min
American Airlines ?
$313
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/19/25
2 Stopovers (CLT, MIA)
AA1490, AA3068, AA1341
24h 11min
Return
09/29/25
2 Stopovers (MIA, CLT)
AA1341, AA1521, AA2991
09h 41min
American Airlines ?
$338
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
06/18/25
1 Stopover (MIA)
AA4124, AA1364
11h 45min
Return
07/15/25
1 Stopover (MIA)
AA1613, AA3493
10h 14min
American Airlines ?
$340
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/04/25
2 Stopovers (CLT, MIA)
AA1834, AA3068, AA0967
31h 16min
Return
09/28/25
1 Stopover (MIA)
AA3089, AA0379
10h 23min
American Airlines ?
$383
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/19/25
1 Stopover (JFK)
B62678, B60303
14h 15min
Return
09/29/25
1 Stopover (JFK)
B60504, B62677
07h 18min
JetBlue Airways ?
$397
Jacksonville, Florida
San Juan (Puerto Rico)
Outbound
09/04/25
2 Stopovers (CLT, MIA)
AA1615, AA0770, AA1613
16h 16min
Return
09/28/25
1 Stopover (MIA)
AA1613, AA0379
04h 58min
American Airlines ?
$413
Prices based on recent searches, subject to last-minute changes
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Tips and tricks to help you find cheap flights from Jacksonville, Florida to San Juan (Puerto Rico)

Favorite airline: Frontier Airlines
The majority of passengers on the route Jacksonville, Florida – San Juan (Puerto Rico) prefer to fly with Frontier Airlines.
Frontier Airlines
46 %
American Airlines
38 %
United Airlines
15 %
Direct flights are the cheapest connection
Compared to direct flights, flights with a stopover on this route are on average 46 % more expensive.
non stop flight
1 stop
2 stops
03h 07min
05h 36min
16h 24min
$ 256
$ 472
$ 1.280
The favorite connection is non-stop
46 % of all bookings on the route Jacksonville, Florida to San Juan (Puerto Rico) are for non-stop flights.
Route
bookings
Direct flights
03h 07min, from $ 256
46 %
1 stopover Charlotte Douglas International Airport, NC
05h 36min, from $ 472
31 %
1 stopover Houston - George Bush Intercontinental Airport, TX
08h 42min, from $ 574
15 %

Important flight information

Flight information: Jacksonville, Florida - San Juan (Puerto Rico)

Roundtrip from $ 245,57
Distance 2076 km
Departure airport Airport Jacksonville, Florida (JAX)
Arrival airport Airport San Juan - Luis Muñoz Marín International Airport (SJU)
Destination country Flights to Puerto Rico
Alternative flights to San Juan (Puerto Rico)
Flight destinations with a similar price